Writing processes

A tutorial about writing bioinformatics pipelines (process is a step in the pipeline) is in Resolwe SDK for Python documentation.


Frequently, it is very useful to write a custom script in Python or R to perform a certain task in process’ algorithm. For an example, see the tutorial in Resolwe SDK for Python documentation.

Custom scripts needed by processes included with Resolwe Bioinformatics are located in the resolwe_bio/tools directory.


A Resolwe’s Flow Executor searches for tools in a Django application’s tools directory or directories specified in the RESOLWE_CUSTOM_TOOLS_PATHS Django setting.